Section on Molecular Transport
 
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2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998

2004

Rostovtseva T. K., Antonsson B., Suzuki M., Youle R. J., Colombini M., Bezrukov S. M. 2004. Bid but not Bax regulates VDAC channels . J. Biol. Chem. 279. [PDF]

O.V. Krasilnikov and S.M. Bezrukov.  Polymer partitioning from non-ideal solutions into protein voids. Macromolecules , 2004, 37:2650-2657. [PDF]

S.M. Bezrukov.  Noise analysis in studies of protein dynamics and molecular transport. Fluctuation and Noise Letters , 2004, 4:L23-L31. [PDF]

Alcaraz A., Nestorovich E.M., Aguilella-Arzo M., Aguilella V. M., Bezrukov S.M.  Salting out the ionic selectivity of a wide channel: The asymmetry of OmpF. Biophys. J. 2004. 87: 943-957. [PDF]

Nestorovich E. M., Bezrukov S. M. Voltage-induced "gating" of bacterial porin as reversible protein denaturation // 2004, Proc. SPIE Vol. 5467, p. 42-53, Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems II; Derek Abbott, Sergey M. Bezrukov, Andras Der, Angel Sanchez; Eds.

2003

L.V. Schagina, P.A. Gurnev, J.Y. Takemoto and V.V. Malev.  Effective gating charge of ion channels induced by toxin syringomycin E in lipid bilayers. Bioelectrochemistry. 2003, 60: 21-27. [PDF]

Nestorovich E. M., Rostovtseva T. K., Bezrukov S. M. 2003. Residue ionization and ion transport through OmpF channels. Biophys J. 85:3718-29. [PDF]

L. Dagdug, A. Berezhkovskii, S.M. Bezrukov, and G.H. Weiss.  Diffusion-controlled reactions with a binding site hidden in the channel.  Journal of Chemical Physics , 2003, 118:2367-2373. [PDF]

A.M. Berezhkovskii, M.A. Pustovoit, and S.M. Bezrukov.  Channel-facilitated membrane transport: Average lifetimes in the channel. Journal of Chemical Physics , 2003, 119:3943-3951. [PDF]

K.S. Stojilkovic, A.M. Berezhkovskii, V.Yu. Zitserman, and S.M. Bezrukov.  Conductivity and microviscosity of electrolyte solutions containing polyethylene glycols.  Journal of Chemical Physics , 2003, 119:6973-6978. [PDF]

Nestorovich E.M., Danelon C., Winterhalter M., Bezrukov S.M. Noise analysis of antibiotic permeation through bacterial channels. // 2003, Proc. SPIE Vol. 5110, p. 57-62, Fluctuations and Noise in Biological, Biophysical, and Biomedical Systems; Sergey M. Bezrukov, Hans Frauenfelder, Frank Moss; Eds.

2002

Rostovtseva T.K., Nestorovich E.M., Bezrukov S.M. Partitioning of Differently Sized Poly(ethylene glycol)s into OmpF Porin. // 2002, Biophys J. V.82, P.160. [PDF]

Rostovtseva, T. K., Nestorovich, E. M., Bezrukov, S. M. 2002. Partitioning of differently sized poly-(ethylene glycol)s into OmpF porin. Biophys. J. 82:160-169. [PDF]

Rostovtseva, T. K., Komarov, A. G., Colombini, M., Bezrukov, S. M. 2002. Dynamics of nucleotides in VDAC channels: structure-specific noise generation. Biophys. J. 82: 193-205. [PDF]

Rostovtseva, T. K., Komarov, A., Bezrukov, S. M., Colombini, M. 2002. VDAC channels differentiate between natural metabolites and synthetic molecules. J. Membrane Biol . 184: 147-156. [PDF]

Roucou, X., Rostovtseva, T.K., Montessuit, S., Martinou, J.-C., Antonsson, B. 2002. Bid induces cytochrome c impermeable Bax channels in liposomes. Biochem J . 363: 547-552. [PDF]

L. Kullman, M. Winterhalter, and S.M. Bezrukov.  Transport of maltodextrins through maltoporin: A single-channel study. Biophysical Journal , 2002, 82: 803-812. [PDF]

A.M. Berezhkovskii, M.A. Pustovoit, and S.M. Bezrukov.  Effect of binding on particle number fluctuations in a membrane channel. Journal of Chemical Physics , 2002, 116: 6216-6220. [PDF]

A.M. Berezhkovskii, M.A. Pustovoit, and S.M. Bezrukov.  Channel-facilitated membrane transport: Transit probability and interaction with the channel. Journal of Chemical Physics , 2002, 116:9952-9956. [PDF]

T.K. Rostovtseva, A. Komarov, S.M. Bezrukov, and M. Colombini.  VDAC channels differentiate between natural metabolites and synthetic molecules. Journal of Membrane Biology , 2002, 187:147-156. [PDF]

S.M. Bezrukov and L.B. Kish. How much power does neural signal propagation need? Smart Materials and Structures , 2002, 11:800-803. [PDF]

E.M. Nestorovich, C. Danelon, M. Winterhalter, and S.M. Bezrukov.  Designed to penetrate: Time-resolved interaction of single antibiotic molecules with bacterial pores. Proc. Natl. Acad. Sci. USA , 2002, 99:9789-9794. [PDF]

A. Alcaraz, E.M. Nestorovich, M. Aguilella-Arzo, V.M. Aguilella, and S.M. Bezrukov.  Salting out the ionic selectivity of a wide channel: The asymmetry of OmpF. Biophysical Journal , 2004, in press.V.V. Malev, L.V. Schagina, P .A. Gurnev, J.Y. Takemoto, E.M. Nestorovich, and S.M. Bezrukov.  Syringomycin E channel: A lipidic pore stabilized by lipopeptide?  Biophysical Journal , 2002, 82: 1985-1994. [PDF]

Z. Szabo, P. Grof, L.V. Schagina, P.A. Gurnev, J.Y. Takemoto, E. Matyus and K.Blasko.  Syringotoxin pore formation and inactivation in human red blood cell and model bilayer lipid membranes. Biochim Biophys Acta. 2002, 1567: 143-149. [PDF]

P.A. Gurnev, Y.A. Kaulin, Tikhomirova A.V., Wangspa R., Takemoto D., Malev V.V. and  Schagina L.V. Activity of toxins produced by Pseudomonas syringae pv. syringae in model and cell membranes Tsitologiia (Cytology). ( in Russian ), 2002, 44: 296-304.

Nestorovich E.M., Rostovtseva T.K., Bezrukov S.M. Residue protonation, transport properties, and structural stability of OmpF channels. // 2002, Biophys J. V.82, P.915.

2001

M. Boguna, L. Kullman, S.M. Bezrukov, A.M. Berezhkovskii, and G.H. Weiss. Rate constants from uncorrelated single-molecule data. Journal of Physical Chemistry , 2001, 105:6246-6250. [PDF]

V.M. Aguilella and S.M. Bezrukov. Alamethicin channel conductance modified by lipid charge. European Biophysics Journal , 2001, 30:233-241. [PDF]

P.S. Ruszczynski, L.B. Kish, and S.M. Bezrukov. Noise-assisted traffic of spikes through neuronal junctions.  Chaos , 2001, 11:581-586. [PDF]

S.M. Bezrukov and J.J. Kasianowicz.  Neutral polymers in the nanopores of alamethicin and alpha-hemolysin.  Biol. Membrany, 2001, 18:453-457. [PDF]

M. Winterhalter, C. Hilty, S.M. Bezrukov, C. Nardin, W. Meier, and D. Fournier. Controlling membrane permeability with bacterial porins: Application to encapsulated enzymes. Talanta , 2001, 55:965-971. [PDF]

V.V. Malev, Y.A. Kaulin, P.A. Gurnev, S.M. Bezrukov, J.Y. Takemoto and L.V. Schagina. Effects of charge distribution on conductance of single channels formed by syringomycin E in lipid bilayers.  Biol. Membrany (in Russian) , 2001, 18:145-153. [PDF]

V.V. Malev, Y.A. Kaulin, S.M. Bezrukov, P.A. Gurnev, J.Y. Takemoto and L.V. Schagina. Kinetics of opening and closure of syringomycin E channels formed in lipid bilayers. Membr Cell Biol. 2001, 14: 813-829.

Malev V.V., Schagina L.V., Takemoto J.Y., Nestorovich E.M., Bezrukov S.M. Gating and Conductance of Syringomicin E channels as Manifestation of an Asymmetrical Channel Structure. // 2001, Biophys J. V.80, P.132A.

Nestorovich E.M., Winterhalter M., Bezrukov S.M. Ampicillin Translocation Through OmpF studied on a single channel level. // 2001, Biophys J. V.80, P.128A.

Nestorovich E.M., Kondrat'ev V.V., and Malev V.V. Effect of the Formation of a Charged Intermediate on the Electroreduction of Cobalt(III) Trioxalate Complexes to Cobalt(0) Atoms. // Russ. J. Electrochemistry. 2001, V.37, P.139.

Nestorovich E.M., Kondratiev V.V., Kourdakova V.V., Malev V.V. Double-Layer Effects in the Electroreduction of Cobalt(III) Trioxalate Complexes to Cobalt(0) Atoms on a Dropping Mercury Electrode // Russ. J. Electrochemistry. 2001, V.37, P.145.

2000

S.M. Bezrukov. Ion channels as molecular Coulter counters to probe metabolite transport.  Journal of Membrane Biology , 2000, 174:1-13. [PDF]

L.B. Kish and S.M. Bezrukov. Flows of cars and neural spikes enhanced by colored noise. Physics Letters A , 2000, 266:271-275. [PDF]

S.M. Bezrukov and M. Winterhalter. Examining noise sources at the single-molecule level: 1/f noise of an open maltoporin channel. Physical Review Letters , 2000, 85:202-205. [PDF]

T.K. Rostovtseva, T.-T. Liu, M. Colombini, V.A. Parsegian, and S.M. Bezrukov. Positive cooperativity without domains or subunits in a monomeric membrane channel. Proc. Natl. Acad. Sci. USA , 2000, 97:7819-7822. [PDF]

S.M. Bezrukov, L. Kullman, and M. Winterhalter. Probing sugar translocation through maltoporin at the single channel level. FEBS Letters , 2000, 476:224-228. [PDF]

S.A. Desai, S.M. Bezrukov, and J. Zimmerberg. A voltage-dependent channel involved in nutrient uptake by red blood cells infected with malaria parasite. Nature (London) , 2000, 406:1001-1005. [PDF]

S.M. Bezrukov. Functional consequences of lipid packing stress.  Current Opinion in Colloid and Interface Science , 2000, 5:237-243. [PDF]

S.M. Bezrukov, A.M. Berezhkovskii, M.A. Pustovoit, and A. Szabo. Particle number fluctuations in a membrane channel. Journal of Chemical Physics , 2000, 113:8206-8211. [PDF]

G. Agner, Y.A. Kaulin, P.A Gurnev, Z. Szabo, L.V. Schagina, J.Y. Takemoto and K. Blasko.  Membrane ?ermeabilizing activities of cyclic lipodepsipeptides, syringopeptin 22A and syringomycin E from Pseudomonas syringae pv. syringae in human red blood cells and bilayer lipid membranes, Bioelectrochemistry, 2000, 52:161-167. [PDF]

V.V. Malev, Y.A. Kaulin, S.M. Bezrukov, P.A. Gurnev, J.Y. Takemoto and L.V. Schagina. Kinetics of opening-closure of channels formed by syringomycin E in lipid bilayers.  Biol. Membrany (in Russian) , 2000, 17:653-665.

1999

A.M. Berezhkovskii, S.M. Bezrukov, D.J. Bicout, and G.H. Weiss. The influence of polymer on the diffusion of a spherical tracer. Journal of Chemical Physics , 1999, 111:5641-5644. [PDF]

P.G.  Merzlyak, L.N. Yuldasheva, C.G. Rodrigues, C.M.M. Carneiro, O.V. Krasilnikov, and S.M. Bezrukov. Polymeric nonelectrolytes to probe pore geometry: Application to the alpha-toxin transmembrane channel.  Biophysical Journal , 1999, 77:3032-3033. [PDF]

Nestorovich E.M., Kondratiev V.V., Malev V.V. The Apparent and True Transfer Coefficients in the Electroreduction of Oxalate Co(II) and Co(III) Complexes on the Dropping Mercury Electrode. Theses of the 2nd Baltic Conference, 1999, 10-12 June P.166.

1998

T.K. Rostovtseva and S.M. Bezrukov. ATP transport through a single mitochondrial channel, VDAC, studied by current fluctuation analysis. Biophysical Journal , 1998, 74:2365-2373. [PDF]

S.M. Bezrukov and I. Vodyanoy. Stochastic resonance in thermally activated reactions: Application to biological ion channels. Chaos , 1998, 8:557-566. [PDF]

T.K. Rostovtseva, V.M. Aguilella, I. Vodyanoy, S.M. Bezrukov, and V.A. Parsegian. Membrane surface-charge titration probed by gramicidin A channel conductance. Biophysical Journal , 1998, 75:1783-1792. [PDF]

S.M. Bezrukov. Stochastic resonance as an inherent property of rate-modulated random series of events.  Physics Letters A , 1998, 248:29-36. [PDF]

N. Sakai, C.Y. Ni, S.M. Bezrukov, and S. Matile. Voltage-dependent ion channel formation by rigid rod-shaped polyols in planar lipid bilayers.  Bioorganic and Medicinal Chemistry Letters , 1998, 8:2743-2746. [PDF]

S.M. Bezrukov, R.P. Rand, I. Vodyanoy, and V.A. Parsegian. Lipid packing stress and polypeptide aggregation: alamethicin channels probed by proton titration of lipid charge.  Faraday Discussions , 1998, 111:173-183.

Yu.A. Kaulin, L.V. Schagina, S.M. Bezrukov, V.V. Malev, A.M. Feigin, J.Y. Takemoto, J.H. Teeter, J.G. Brand. Cluster organization of ion channels formed by the antibiotic syringomycin E in bilayer lipid membranes. Biophysical Journal , 1998, 74:2918-2925.

Commentary on our Work

S. Hurtley. Designed to penetrate. Science (Editors' Choice) , 2002, 207:479.

E. Combres. Bacterie et antibiotique: les liaisons dangereuses. Le journal de CNRS (Vie des Labos) , 2003, 157-158, janvier-fevrier.


2004 | 2003 | 2002 | 2001 | 2000 | 1999 | 1998

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